Page Not Found
Page not found. Your pixels are in another canvas.
A list of all the posts and pages found on the site. For you robots out there is an XML version available for digesting as well.
Page not found. Your pixels are in another canvas.
About me
This is a page not in th emain menu
Published:
This post will show up by default. To disable scheduling of future posts, edit config.yml
and set future: false
.
Published:
This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
Published:
This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
Published:
This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
Published:
This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
Short description of portfolio item number 1
Short description of portfolio item number 2
Published in Applied Physics Letters, 2014
We address the fragmentation of thin, brittle layers due to the impact of high-velocity projectiles. Our approach is a geometric statistical one, with lines and circles playing the role of cracks randomly located over the surface and following distributions that come from an analysis of how the energy input propagates and dissipates over the material. The cumulative mass distributions F(m) we obtain are in excellent agreement with the data produced by Kadono [Phys. Rev. Lett. 78, 1444 (1997)]. In the small mass regime we get F(m) prop to m^(-alpha) for a broad range of dissipation strengths and total number of fragments. In addition we obtain the fractal dimension of the set of cracks and its correlation to the exponent alpha that account for the experimental results given by Kadono and Arakawa [Phys. Rev. E 65, 035107(R) (2002)].
Download here
Published in Scientific reports, 2017
Download here
Published in Physical Biology, 2020
Download here
Published in PLoS Computational Biology, 2020
Download here
Published in Vaccine, 2021
Download here
Published in Epidemics, 2021
Download here
Published in Epidemics, 2022
Following the emergence of COVID-19 at the end of 2019, several mathematical models have been developed to study the transmission dynamics of this disease. Many of these models assume homogeneous mixing in the underlying population. However, contact rates and mixing patterns can vary dramatically among individuals depending on their age and activity level. Variation in contact rates among age groups and over time can significantly impact how well a model captures observed trends. To properly model the age-dependent dynamics of COVID-19 and understand the impacts of interventions, it is essential to consider heterogeneity arising from contact rates and mixing patterns. We developed an age-structured model that incorporates time-varying contact rates and population mixing computed from the ongoing BC Mix COVID-19 survey to study transmission dynamics of COVID-19 in British Columbia (BC), Canada. Using a Bayesian inference framework, we fit four versions of our model to weekly reported cases of COVID-19 in BC, with each version allowing different assumptions of contact rates. We show that in addition to incorporating age-specific contact rates and mixing patterns, time-dependent (weekly) contact rates are needed to adequately capture the observed transmission dynamics of COVID-19. Our approach provides a framework for explicitly including empirical contact rates in a transmission model, which removes the need to otherwise model the impact of many non-pharmaceutical interventions. Further, this approach allows projection of future cases based on clear assumptions of age-specific contact rates, as opposed to less tractable assumptions regarding transmission rates.
Download here
Published in Foodborne pathogens and disease, 2024
Salmonella is one of the main causes of human foodborne illness. It is endemic worldwide, with different animals and animal-based food products as reservoirs and vehicles of infection. Identifying animal reservoirs and potential transmission pathways of Salmonella is essential for prevention and control. There are many approaches for source attribution, each using different statistical models and data streams. Some aim to identify the animal reservoir, while others aim to determine the point at which exposure occurred. With the advance of whole-genome sequencing (WGS) technologies, new source attribution models will greatly benefit from the discriminating power gained with WGS. This review discusses some key source attribution methods and their mathematical and statistical tools. We also highlight recent studies utilizing WGS for source attribution and discuss open questions and challenges in developing new WGS methods. We aim to provide a better understanding of the current state of these methodologies with application to Salmonella and other foodborne pathogens that are common sources of illness in the poultry and human sectors.
Download here
Published:
Talk on “Reverse mathematical methods for reconstructing molecular dynamics in single cell”.
Published:
Oral presentation at the BC CDC Research week on my work on wastewater-based surveillance.
Published:
BC CDC Data Science Rounds. 1h lecture introducing basic tools and common methods for forecasting. The lecture was based on the book “Forecasting: Principles and Practices” by Rob J Hyndman and George Athanasopoulos.
Published:
Talk I co-presented at the Provincial Data and Analytics Summit on the development of wastewater-based surveillance for viral infections, one of the projects I’m leading in my Postdoctoral fellowship.
Published:
Oral presentation at the Maud Menten HQP Summit and Working Group on my work developing Salmoenlla transmission models within BC poultry industry. MM HQP Summit
Published:
Oral presentation at the BC CDC Research week on my work using simulations models to support BCCDC PHL in their sequencing strategies.
Undergraduate course, University 1, Department, 2014
This is a description of a teaching experience. You can use markdown like any other post.
Workshop, University 1, Department, 2015
This is a description of a teaching experience. You can use markdown like any other post.